Institut de Genetique et Microbiologie

  G P M S
Genomes, Polymorphism and Minisatellites



  The Microorganisms Tandem Repeats Database

 Please quote :
1-On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing. Grissa I, Bouchon P, Pourcel C, Vergnaud G. Biochimie. 2008 Apr;90(4):660-8.
2-Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource. Denoeud F, Vergnaud G. BMC Bioinformatics. 2004. Jan 12;5:4.
3-A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. Le Flèche P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P, Benson G, Ramisse F, Vergnaud G. BMC Microbiology. 2001. 1:2.

  •  Access the microbial tandem repeats database main page:

    -  Archaea

    -  Bacteria

    -  Viruses

  •   Access the Blast in the tandem repeats database:

    -  The standard Blast page

    -  The PCR primers Blast page

    -  The multiple primers Blast page


Minisat db 2.0 is online, for comments, contact

Link to the laboratory main page: