G P M S
Genomes, Polymorphism and Minisatellites

  The Microorganisms Tandem Repeats Database

Please quote : 1-On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing. Grissa I, Bouchon P, Pourcel C, Vergnaud G. Biochimie. 2008 Apr;90(4):660-8. 2-Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource. Denoeud F, Vergnaud G. BMC Bioinformatics. 2004. Jan 12;5:4. 3-A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. Le Flèche P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P, Benson G, Ramisse F, Vergnaud G. BMC Microbiology. 2001. 1:2.  Access the microbial tandem repeats database main page:     -  Archaea     -  Bacteria     -  Viruses   Access The Strain Comparison Page   Access the multiple comparison page(Not yet implemented)   Access The Published VNTR primers page   Access the Blast in the tandem repeats database:     -  The standard Blast page     -  The PCR primers Blast page     -  The multiple primers Blast page     Access The Bacterial Genotyping Page   Access Human minisatellites, no update since Denoeud et al., 2003 : Chromosome 21 Chromosome 22

Minisat db 2.0 is online, for comments, contact Patrick_Bouchon@yahoo.fr